Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921142.1_cds_XP_016470160.1_62636
CDS Infomation

[gene=LOC107792462] [db_xref=GeneID:107792462] [protein=pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like] [protein_id=XP_016470160.1] [location=join(26023..26292,28294..29529)] [gbkey=CDS]
Sequence

ATGATCCGGAGTTTGACCCGCCAGATTTCAAAGGAAGCAGCAGTCAACCTGAGAAGACTA
TGTACCACGGCGGCAGCGGCGGTGAAGGAGGAGCAGTGTGAAGGAGACCGGCGGCTCTAC
CTGAGATTGTGGGCTTTGGAAGCTACAAATGGGTCGGTTAGTGAAACAATAAATGAGTAT
ATTAGAGAAGGCAGAGTTGTGAAGAAGTATGAACTGAACAAATGCATAAAGGAGCTGCGT
AAACATAGACGATATCAACATGCCCTTGAGATAATGGACTGGATGGAGAGAAGAGGTATA
AAATTGTCGTTTGGTGATTATGGAGTACGGTTAGATCTCATAGCAAAAGTTCAAGGAATA
ACGGCAGCTGAAAATTACTTTGGCAGCCTCTCACCTTCGATGCAGATTCAAAGCACTTAT
GGAGCACTCTTGCATTGCTACTGTGTTGAAAAAATGACAGACAAGGCGTTGTCCCTCTTT
GAGAAAATGGATCAATTGAATTTTGCATCTAATTCATGGACATTCAACAATCTTATGTCC
TTATATATGAGACTAGGGCAACCAGAAAAAGTACCCTCCTTGGTACAGGAAATGAAGAGT
AGAAAGGTTCCACTATGTACATTTTCGTATAGTATCTTGATGAATAGCTATTCTTGTTTA
GATGATATAGAAGGAGTGGAAAGAGTCTTTGAGGAGATAAAGCAGGAGAATGTAGAGGAG
TGCGATTGGACCATATATAGTAACTTGGCTGTTGCTTATGTTAAGGCTGGGCTTCATGAC
AAAGCTGAGTTAGCTCTAAAGAAGCTTGAGGAAGAGATGGGACCTCGTAATCGTGAGGCA
TACCACTATTTGATTAGTTTGCATGCCGGAATATCTAATCTTGTTGAGGTTTATCGTATT
TGGAATTCTCTAAAGTCTGGTTTCTTGGAAATAACCAATTCTAGTTATCTTGTCATGTTT
CAGTCCCTCAGTAAGCTTAATGACATGGATGGTTTAAAGAAATGCTATGAGGAATGGGAA
TCGAGCTGCCCTAGTTACACTATGAGGCTGCCAAATAATGTCATTAGTGCTTGTCTGAGA
AATGACATGCTACATGATGCGGAGGAACTCTTTCTTCGTGCTTTGAAGCGATCACAAGGA
CCTTTCTTCTTGGCTTGGGAAATGTTCATAGCATTCTTTTTGAGGCATCGTCGAATCGAT
CTTGCTATGGAGTGCCTGGAAGCAGTTGTATTCCTTGTAAAGGAGAATGAGTGGCAACCA
AAATGTGAAACAATAAATAAATTTCTCGAGTATTTTGTAGAAGAGAGAGATGTTGGTGGT
GCTGAGGAGTTCTACAAGTATTTGAAAAAGCTGAATTGTCTTAGTAGTGATATATATAGT
TCATTGCTTCACACTTACATAGCTGCCAACAGAACAGCAGACGATATGCTAGTGAGAATT
AAGGAAGATGGAATTGAAATGAGCTGCGAGCTCGAAGGCTTGCTTAAAAGGGTTTGTCCT
GAATAA

Peptide Sequence

PEP ID

XP_016470160.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like [Nicotiana tabacum]
Sequence

MIRSLTRQISKEAAVNLRRLCTTAAAAVKEEQCEGDRRLYLRLWALEATNGSVSETINEY
IREGRVVKKYELNKCIKELRKHRRYQHALEIMDWMERRGIKLSFGDYGVRLDLIAKVQGI
TAAENYFGSLSPSMQIQSTYGALLHCYCVEKMTDKALSLFEKMDQLNFASNSWTFNNLMS
LYMRLGQPEKVPSLVQEMKSRKVPLCTFSYSILMNSYSCLDDIEGVERVFEEIKQENVEE
CDWTIYSNLAVAYVKAGLHDKAELALKKLEEEMGPRNREAYHYLISLHAGISNLVEVYRI
WNSLKSGFLEITNSSYLVMFQSLSKLNDMDGLKKCYEEWESSCPSYTMRLPNNVISACLR
NDMLHDAEELFLRALKRSQGPFFLAWEMFIAFFLRHRRIDLAMECLEAVVFLVKENEWQP
KCETINKFLEYFVEERDVGGAEEFYKYLKKLNCLSSDIYSSLLHTYIAANRTADDMLVRI
KEDGIEMSCELEGLLKRVCPE

Transcript Sequence

Gene sequence data has not been registered.